Index _ | B | C | D | E | F | G | I | L | M | N | O | P | R | S | T _ __init__() (peppr.BiSyRMSD method) (peppr.BondLengthViolations method) (peppr.ClashCount method) (peppr.ContactFraction method) (peppr.DockQ method) (peppr.DockQScore method) (peppr.GlobalLDDTScore method) (peppr.InterfaceRMSD method) (peppr.IntraLigandLDDTScore method) (peppr.LDDTPLIScore method) (peppr.LDDTPPIScore method) (peppr.LigandRMSD method) (peppr.MeanSelector method) (peppr.MedianSelector method) (peppr.Metric method) (peppr.MonomerLDDTScore method) (peppr.MonomerRMSD method) (peppr.MonomerTMScore method) (peppr.OracleSelector method) (peppr.PocketAlignedLigandRMSD method) (peppr.RandomSelector method) (peppr.Selector method) (peppr.TopSelector method) B bisy_rmsd() (in module peppr) BiSyRMSD (class in peppr) BondLengthViolations (class in peppr) C ClashCount (class in peppr) ContactFraction (class in peppr) D DockQ (class in peppr) dockq() (in module peppr) DockQScore (class in peppr) E EvaluationWarning Evaluator (class in peppr) F feed() (peppr.Evaluator method) find_clashes() (in module peppr) find_matching_atoms() (in module peppr) fnat() (in module peppr) G get_contact_residues() (in module peppr) get_results() (peppr.Evaluator method) GlobalLDDTScore (class in peppr) GraphMatchWarning I InterfaceRMSD (class in peppr) IntraLigandLDDTScore (class in peppr) irmsd() (in module peppr) is_small_molecule() (in module peppr) L LDDTPLIScore (class in peppr) LDDTPPIScore (class in peppr) LigandRMSD (class in peppr) lrmsd() (in module peppr) M MatchWarning MeanSelector (class in peppr) MedianSelector (class in peppr) Metric (class in peppr) MonomerLDDTScore (class in peppr) MonomerRMSD (class in peppr) MonomerTMScore (class in peppr) N NoContactError O OracleSelector (class in peppr) P pocket_aligned_lrmsd() (in module peppr) PocketAlignedLigandRMSD (class in peppr) Python Enhancement Proposals PEP 8 R RandomSelector (class in peppr) S sanitize() (in module peppr) Selector (class in peppr) standardize() (in module peppr) summarize_metrics() (peppr.Evaluator method) T tabulate_metrics() (peppr.Evaluator method) TopSelector (class in peppr)